Optimization of parameters for coverage of low molecular weight proteins
- Author
- MÜLLER, Stephan A1 ; KOHAJDA, Tibor2 ; FINDEISS, Sven3 ; STADLER, Peter F3 4 5 6 7 ; WASHIETL, Stefan8 ; KELLIS, Manolis8 ; VON BERGEN, Martin1 2 ; KALKHOF, Stefan1
[1] Department of Proteomics, UFZ, Helmholtz-Centre for Environmental Research, Permoserstrasse 15, 04318 Leipzig, Germany
[2] Department of Metabolomics, UFZ, Helmholtz-Centre for Environmental Research, Permoserstrasse 15, 04318 Leipzig, Germany
[3] Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics, University of Leipzig, Härtelstrasse 16-18, 04107 Leipzig, Germany
[4] Institute for Theoretical Chemistry, University of Vienna, Währingerstrasse 17, 1090 Wien, Austria
[5] Max Planck Institute for Mathematics in the Sciences, Inselstrasse 22, 04103 Leipzig, Germany
[6] Nomics Group, Fraunhofer Institute for Cell Therapy and Immunology, Deutscher Platz 5e, 04103 Leipzig, Germany
[7] Santa Fe Institute, 1399 Hyde Park Rd, Santa Fe, NM 87501, United States
[8] Computer Science and Artificial Intelligence Laboratory, Broad Institute, Massachusetts Institute of Technology, Cambridge, MA 02139, United States - Conference name
- German Society for Mass Spectrometry. Annual Meeting (43 ; 2010-03-07)
- Source
Analytical & bioanalytical chemistry (Print). 2010, Vol 398, Num 7-8, pp 2867-2881, 15 p ; ref : 41 ref
- ISSN
- 1618-2642
- Scientific domain
- Food science technology; Analytical chemistry; Chemistry
- Publisher
- Springer, Heidelberg
- Publication country
- Germany
- Document type
- Conference Paper
- Language
- English
- Author keyword
- Escherichia coli LTQ Orbitrap Low molecular weight proteome MS Nano-ESI-MS Nano-HPLC Proteomics
- Keyword (fr)
- Activation par collision Analyseur Base de données Chevauchement Cycle cellulaire Dessalage Digestion Dissociation Escherichia coli Etalon Extraction Fragmentation Identification Lyse Masse moléculaire Optimisation Paramètre Peptide Piège ion Protéine Protéolyse Préparation échantillon Rendement Ribosome Réduction Spectrométrie masse Température Transfert électron Urée Urées Utilisation Bactérie Enterobacteriaceae
- Keyword (en)
- Collisional activation Analyzer Database Overlap Cell cycle Desalting Digestion Dissociation Escherichia coli Standard Extraction Fragmentation Identification Lysis Molecular mass Optimization Parameter Peptides Ion trap Protein Proteolysis Sample preparation Yield Ribosome Reduction Mass spectrometry Temperature Electron transfer Urea Ureas Use Bacteria Enterobacteriaceae
- Keyword (es)
- Activación por colisión Analizador Base dato Imbricación Ciclo celular Desalado Digestión Disociación Escherichia coli Marco Extracción Fragmentación Identificación Lisis Masa molecular Optimización Parámetro Péptido Trampa ión Proteína Proteolisis Preparación muestreo Rendimiento Ribosoma Reducción Espectrometría masa Temperatura Transferencia electrón Urea Ureas Uso Bacteria Enterobacteriaceae
- Classification
- Pascal
- 001 Exact sciences and technology / 001C Chemistry / 001C04 Analytical chemistry / 001C04C Spectrometric and optical methods
- Pascal
- 002 Biological and medical sciences / 002A Fundamental and applied biological sciences. Psychology / 002A04 Molecular and cellular biology / 002A04C Molecular genetics / 002A04C06 Translation. Translation factors. Protein processing
- Pascal
- 002 Biological and medical sciences / 002A Fundamental and applied biological sciences. Psychology / 002A04 Molecular and cellular biology / 002A04H Cell physiology / 002A04H02 Cell cycle, cell proliferation
- Discipline
- Analytical chemistry Molecular and cell biology
- Origin
- Inist-CNRS
- Database
- PASCAL
- INIST identifier
- 23500798
Sauf mention contraire ci-dessus, le contenu de cette notice bibliographique peut être utilisé dans le cadre d’une licence CC BY 4.0 Inist-CNRS / Unless otherwise stated above, the content of this bibliographic record may be used under a CC BY 4.0 licence by Inist-CNRS / A menos que se haya señalado antes, el contenido de este registro bibliográfico puede ser utilizado al amparo de una licencia CC BY 4.0 Inist-CNRS
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DOI
10.1007/s00216-010-4093-x 
https://dx.doi.org/10.1007/s00216-010-4093-x
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