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Iterative Correction of Reference Nucleotides (iCORN) using second generation sequencing technologyOTTO, Thomas D; SANDERS, Mandy; BERRIMAN, Matthew et al.Bioinformatics (Oxford. Print). 2010, Vol 26, Num 14, pp 1704-1707, issn 1367-4803, 4 p.Article

DNAPlotter : circular and linear interactive genome visualizationCARVER, Tim; THOMSON, Nick; BLEASBY, Alan et al.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 1, pp 119-120, issn 1367-4803, 2 p.Article

New insights into the blood-stage transcriptome of Plasmodium falciparum using RNA-SeqOTTO, Thomas D; WILINSKI, Daniel; NEWBOLD, Chris et al.Molecular microbiology (Print). 2010, Vol 76, Num 1, pp 12-24, issn 0950-382X, 13 p.Article

Genome sequence of Theileria parva, a bovine pathogen that transforms lymphocytesGARDNER, Malcolm J; BISHOP, Richard; WILSON, Robert J. M et al.Science (Washington, D.C.). 2005, Vol 309, Num 5731, pp 134-137, issn 0036-8075, 4 p.Article

Integration of tools and resources for display and analysis of genomic data for protozoan parasitesASLETT, Martin; MOONEY, Paul; WOOD, Valerie et al.International journal for parasitology. 2005, Vol 35, Num 5, pp 481-493, issn 0020-7519, 13 p.Article

Identity crisis? The need for systematic gene IDsPARSONS, Marilyn; MYLER, Peter J; BERRIMAN, Matthew et al.Trends in parasitology. 2011, Vol 27, Num 5, pp 183-184, issn 1471-4922, 2 p.Article

ABACAS: algorithm-based automatic contiguation of assembled sequencesASSEFA, Samuel; KEANE, Thomas M; OTTO, Thomas D et al.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 15, pp 1968-1969, issn 1367-4803, 2 p.Article

The genome of the blood fluke Schistosoma mansoniBERRIMAN, Matthew; HAAS, Brian J; ASLETT, Martin A et al.Nature (London). 2009, Vol 460, Num 7253, pp 352-358, issn 0028-0836, 7 p.Article

The genome of the kinetoplastid parasite, Leishmania major : Trypanosomatid GenomesIVENS, Alasdair C; PEACOCK, Christopher S; ANUPAMA, Atashi et al.Science (Washington, D.C.). 2005, Vol 309, Num 5733, pp 436-442, issn 0036-8075, 7 p.Article

Comparative genomics of trypanosomatid parasitic protozoa : Trypanosomatid GenomesEL-SAYED, Najib M; MYLER, Peter J; GHEDIN, Elodie et al.Science (Washington, D.C.). 2005, Vol 309, Num 5733, pp 404-409, issn 0036-8075, 6 p.Article

The genome of the African trypanosome Trypanosoma brucei : Trypanosomatid GenomesBERRIMAN, Matthew; GHEDIN, Elodie; BÖHME, Ulrike et al.Science (Washington, D.C.). 2005, Vol 309, Num 5733, pp 416-422, issn 0036-8075, 7 p.Article

Vector transmission regulates immune control of Plasmodium virulenceSPENCE, Philip J; JARRA, William; LEVY, Prisca et al.Nature (London). 2013, Vol 498, Num 7453, pp 228-231, issn 0028-0836, 4 p.Article

Genome-wide SNP and microsatellite variation illuminate population-level epidemiology in the Leishmania donovani species complexDOWNING, Tim; STARK, Olivia; DUJARDIN, Jean-Claude et al.Infection, genetics and evolution (Print). 2012, Vol 12, Num 1, pp 149-159, issn 1567-1348, 11 p.Article

High―throughput decoding of antitrypanosomal drug efficacy and resistanceALSFORD, Sam; ECKERT, Sabine; BAKER, Nicola et al.Nature (London). 2012, Vol 482, Num 7384, pp 232-236, issn 0028-0836, 5 p.Article

Schistosoma mansoni genome : Closing in on a final gene setHAAS, Brian J; BERRIMAN, Matthew; HIRAI, Hirohisa et al.Experimental parasitology. 2007, Vol 117, Num 3, pp 225-228, issn 0014-4894, 4 p.Conference Paper

BamView: viewing mapped read alignment data in the context of the reference sequenceCARVER, Tim; BÖHME, Ulrike; OTTO, Thomas D et al.Bioinformatics (Oxford. Print). 2010, Vol 26, Num 5, pp 676-677, issn 1367-4803, 2 p.Article

Artemis: an integrated platform for visualization and analysis of high-throughput sequence-based experimental dataCARVER, Tim; HARRIS, Simon R; BERRIMAN, Matthew et al.Bioinformatics (Oxford. Print). 2012, Vol 28, Num 4, pp 464-469, issn 1367-4803, 6 p.Article

Comparative genomic analysis of three Leishmania species that cause diverse human diseasePEACOCK, Christopher S; SEEGER, Kathy; KERHORNOU, Arnaud et al.Nature genetics. 2007, Vol 39, Num 7, pp 839-847, issn 1061-4036, 9 p.Article

Differential var gene expression in the organs of patients dying of falciparum malariaMONTGOMERY, Jacqui; MPHANDE, Fingani A; BERRIMAN, Matthew et al.Molecular microbiology (Print). 2007, Vol 65, Num 4, pp 959-967, issn 0950-382X, 9 p.Article

Genome variation and evolution of the malaria parasite Plasmodium falciparumJEFFARES, Daniel C; PAIN, Arnab; KYES, Sue et al.Nature genetics. 2007, Vol 39, Num 1, pp 120-125, issn 1061-4036, 6 p.Article

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analysesHALL, Neil; KARRAS, Marianna; JAMES, Keith et al.Science (Washington, D.C.). 2005, Vol 307, Num 5706, pp 82-86, issn 0036-8075, 5 p.Article

ACT : the Artemis comparison toolCARVER, Tim J; RUTHERFORD, Kim M; BERRIMAN, Matthew et al.Bioinformatics (Oxford. Print). 2005, Vol 21, Num 16, pp 3422-3423, issn 1367-4803, 2 p.Article

Silencing of Germline-Expressed Genes by DNA Elimination in Somatic CellsJIANBIN WANG; MITREVA, Makedonka; BERRIMAN, Matthew et al.Developmental cell. 2012, Vol 23, Num 5, pp 1072-1080, issn 1534-5807, 9 p.Article

Evolution of pathogenicity and sexual reproduction in eight Candida genomesBUTLER, Geraldine; RASMUSSEN, Matthew D; AGRAFIOTI, Ino et al.Nature (London). 2009, Vol 459, Num 7247, pp 657-662, issn 0028-0836, 6 p.Article

Artemis and ACT : viewing, annotating and comparing sequences stored in a relational databaseCARVER, Tim; BERRIMAN, Matthew; TIVEY, Adrian et al.Bioinformatics (Oxford. Print). 2008, Vol 24, Num 23, pp 2672-2676, issn 1367-4803, 5 p.Article

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