Intrinsic Conformational Preferences of C^α,α-DibenzylglycineCASANOVAS, Jordi; NUSSINOV, Ruth; ALEMAN, Carlos et al.Journal of organic chemistry. 2008, Vol 73, Num 11, pp 4205-4211, issn 0022-3263, 7 p.Article

Predicting molecular interactions in silico. II: Protein-protein and protein-drug dockingSCHNEIDMAN-DUHOVNY, Dina; NUSSINOV, Ruth; WOLFSON, Haim J et al.Current medicinal chemistry. 2004, Vol 11, Num 1, pp 91-107, issn 0929-8673, 17 p.Article

The Different Ways through Which Specificity Works in Orthosteric and Allosteric DrugsNUSSINOV, Ruth; TSAI, Chung-Jung.Current pharmaceutical design (Print). 2012, Vol 18, Num 9, pp 1311-1316, issn 1381-6128, 6 p.Article

Energetic determinants of protein binding specificity : Insights into protein interaction networksCARBONELL, Pablo; NUSSINOV, Ruth; DEL SOL, Antonio et al.Proteomics (Weinheim. Print). 2009, Vol 9, Num 7, pp 1744-1753, issn 1615-9853, 10 p.Article

Intrinsic conformational characteristics of α,α-diphenylglycineCASANOVAS, Jordi; ZANUY, David; NUSSINOV, Ruth et al.Journal of organic chemistry. 2007, Vol 72, Num 6, pp 2174-2181, issn 0022-3263, 8 p.Article

Atomic-level description of amyloid β-dimer formationGNANAKARAN, S; NUSSINOV, Ruth; GARCIA, Angel E et al.Journal of the American Chemical Society. 2006, Vol 128, Num 7, pp 2158-2159, issn 0002-7863, 2 p.Article

Discovery of protein substructures in EM mapsLASKER, Keren; DROR, Oranit; NUSSINOV, Ruth et al.Lecture notes in computer science. 2005, pp 423-434, issn 0302-9743, isbn 3-540-29008-7, 1Vol, 12 p.Conference Paper

Mechanisms of transcription factor selectivityYONGPING PAN; TSAI, Chung-Jung; BUYONG MA et al.Trends in genetics (Regular ed.). 2010, Vol 26, Num 2, pp 75-83, issn 0168-9525, 9 p.Article

MAPPIS : Multiple 3D alignment of protein-protein interfacesSHULMAN-PELEG, Alexandra; SHATSKY, Maxim; NUSSINOV, Ruth et al.Lecture notes in computer science. 2005, pp 91-103, issn 0302-9743, isbn 3-540-29104-0, 1Vol, 13 p.Conference Paper

Conformational Distribution and α-Helix to β-Sheet Transition of Human Amylin Fragment DimerRUXI QI; YIN LUO; BUYONG MA et al.Biomacromolecules. 2014, Vol 15, Num 1, pp 122-131, issn 1525-7797, 10 p.Article

Computational Validation of Protein NanotubesBUCH, Idit; BROOKS, Bernard R; WOLFSON, Haim J et al.Nano letters (Print). 2009, Vol 9, Num 3, pp 1096-1102, issn 1530-6984, 7 p.Article

Structure by design : from single proteins and their building blocks to nanostructuresTSAI, Chung-Jung; JIE ZHENG; ALEMAN, Carlos et al.Trends in biotechnology (Regular ed.). 2006, Vol 24, Num 10, pp 449-454, issn 0167-7799, 6 p.Article

A survey of available tools and web servers for analysis of protein-protein interactions and interfacesTUNCBAG, Nurcan; KAR, Gozde; KESKIN, Ozlem et al.Briefings in bioinformatics. 2009, Vol 10, Num 3, pp 217-232, issn 1467-5463, 16 p.Article

Predicting molecular interactions in silico. I: A guide to pharmacophore identification and its applications to drug designDROR, Oranit; SHULMAN-PELEG, Alexandra; NUSSINOV, Ruth et al.Current medicinal chemistry. 2004, Vol 11, Num 1, pp 71-90, issn 0929-8673, 20 p.Article

A Strategy Based on Protein―Protein Interface Motifs May Help in Identifying Drug Off-TargetsBILLUR ENGIN, H; KESKIN, Ozlem; NUSSINOV, Ruth et al.Journal of chemical information and modeling. 2012, Vol 52, Num 8, pp 2273-2286, issn 1549-9596, 14 p.Article

A permissive secondary structure-guided superposition tool for clustering of protein fragments toward protein structure prediction via fragment assemblyWAINREB, Gilad; HASPEL, Nurit; WOLFSON, Haim J et al.Bioinformatics (Oxford. Print). 2006, Vol 22, Num 11, pp 1343-1352, issn 1367-4803, 10 p.Article

Structure and dynamics of molecular networks: A novel paradigm of drug discovery A comprehensive reviewCSERMELY, Peter; KORCSMAROS, Tamás; KISS, Huba J. M et al.Pharmacology & therapeutics (Oxford). 2013, Vol 138, Num 3, pp 333-408, issn 0163-7258, 76 p.Article

Side-Chain to Backbone Interactions Dictate the Conformational Preferences of a Cyclopentane Arginine AnalogueREVILLA-LOPEZ, Guillem; TORRAS, Juan; JIMENEZ, Ana I et al.Journal of organic chemistry. 2009, Vol 74, Num 6, pp 2403-2412, issn 0022-3263, 10 p.Article

Conformational Preferences of α-Substituted Proline AnaloguesFLORES-ORTEGA, Alejandra; JIMENEZ, Ana I; CATIVIELA, Carlos et al.Journal of organic chemistry. 2008, Vol 73, Num 9, pp 3418-3427, issn 0022-3263, 10 p.Article

Protein-protein interfaces: Recognition of similar spatial and chemical organizationsSHULMAN-PELEG, Alexandra; MINTZ, Shira; NUSSINOV, Ruth et al.Lecture notes in computer science. 2004, pp 194-205, issn 0302-9743, isbn 3-540-23018-1, 12 p.Conference Paper

1-Amino-2-Phenylcyclopentane-1-carboxylic Acid : A Conformationally Restricted Phenylalanine AnalogueCASANOVAS, Jordi; JIMENEZ, Ana I; CATIVIELA, Carlos et al.Journal of organic chemistry. 2008, Vol 73, Num 2, pp 644-651, issn 0022-3263, 8 p.Article

Familial Alzheimer's Disease Osaka Mutant (ΔE22) β-Barrels Suggest an Explanation for the Different Aβ_1―40/42 Preferred Conformational States Observed by ExperimentHYUNBUM JANG; ARCE, Fernando Teran; RAMACHANDRAN, Srinivasan et al.The Journal of physical chemistry. B. 2013, Vol 117, Num 39, pp 11518-11529, issn 1520-6106, 12 p.Article

Conformational Profile of a Proline—Arginine HybridREVILLA-LOPEZ, Guillermo; JIMENEZ, Ana I; CATIVIELA, Carlos et al.Journal of chemical information and modeling. 2010, Vol 50, Num 10, pp 1781-1789, issn 1549-9596, 9 p.Article

Stability of tubular structures based on β-helical proteins : Self-assembled versus polymerized nanoconstructs and wild-type versus mutated sequencesZANUY, David; RODRIGUEZ-ROPERO, Francisco; HASPEL, Nurit et al.Biomacromolecules. 2007, Vol 8, Num 10, pp 3135-3146, issn 1525-7797, 12 p.Article

Alzheimer's disease: which type of amyloid-preventing drug agents to employ? : Insights into protein misfolding and amyloidogenesisJANG, Hyunbum; CONNELLY, Laura; TERAN ARCE, Fernando et al.PCCP. Physical chemistry chemical physics (Print). 2013, Vol 15, Num 23, pp 8868-8877, issn 1463-9076, 10 p.Article