FDM: a graph-based statistical method to detect differential transcription using RNA-seq dataSINGH, Darshan; ORELLANA, Christian F; YIN HU et al.Bioinformatics (Oxford. Print). 2011, Vol 27, Num 19, pp 2633-2640, issn 1367-4803, 8 p.Article

A probabilistic framework for aligning paired-end RNA-seq dataYIN HU; KAI WANG; XIAPING HE et al.Bioinformatics (Oxford. Print). 2010, Vol 26, Num 16, pp 1950-1957, issn 1367-4803, 8 p.Article

LCPC '98 : languages and compilers for parallel computing (Chapel Hill NC, 7-9 August 1998)Chatterjee, Siddharta; Prins, Jan F; Carter, Larry et al.Lecture notes in computer science. 1999, issn 0302-9743, isbn 3-540-66426-2, XI, 384 p, isbn 3-540-66426-2Conference Proceedings

Principles of speculative run-time parallelizationPATEL, D; RAUCHWERGER, L.Lecture notes in computer science. 1999, pp 323-337, issn 0302-9743, isbn 3-540-66426-2Conference Paper

Optimized execution of Fortran 90 array language on symmetric shared-memory multiprocessorsSARKAR, V.Lecture notes in computer science. 1999, pp 131-147, issn 0302-9743, isbn 3-540-66426-2Conference Paper

Fortran RED : A retargetable environment for automatic data layoutKREMER, U.Lecture notes in computer science. 1999, pp 148-165, issn 0302-9743, isbn 3-540-66426-2Conference Paper

The advantages of instance-wise reaching definition analyses in Array (S)SACOLLARD, J.-F.Lecture notes in computer science. 1999, pp 338-352, issn 0302-9743, isbn 3-540-66426-2Conference Paper

Object-oriented implementation of data-parallelism on global networksBOROWIEC, J.Lecture notes in computer science. 1999, pp 120-130, issn 0302-9743, isbn 3-540-66426-2Conference Paper

SIPR : A new framework for generating efficient code for sparse matrix computationsPUGH, W; SHPEISMAN, T.Lecture notes in computer science. 1999, pp 213-229, issn 0302-9743, isbn 3-540-66426-2Conference Paper

Beyond arrays : A container-centric approach for parallelization of real-world symbolic applicationsPENG WU; PADUA, D.Lecture notes in computer science. 1999, pp 197-212, issn 0302-9743, isbn 3-540-66426-2Conference Paper

I/O granularity transformationsAGRAWAL, G.Lecture notes in computer science. 1999, pp 68-82, issn 0302-9743, isbn 3-540-66426-2Conference Paper

From flop to megaflops : Java for technical computingMOREIRA, J. E; MIDKIFF, S. P; GUPTA, M et al.Lecture notes in computer science. 1999, pp 1-17, issn 0302-9743, isbn 3-540-66426-2Conference Paper

Dependency analysis of recursive data structures using automatic groupsARVIND, D. K; LEWIS, T. A.Lecture notes in computer science. 1999, pp 353-366, issn 0302-9743, isbn 3-540-66426-2Conference Paper

Integrated instruction scheduling and register allocation techniquesBERSON, D. A; GUPTA, R; SOFFA, M. L et al.Lecture notes in computer science. 1999, pp 247-262, issn 0302-9743, isbn 3-540-66426-2Conference Paper

Copy elimination for parallelizing compilersKOLSON, D. J; NICOLAU, A; DUTT, N et al.Lecture notes in computer science. 1999, pp 275-289, issn 0302-9743, isbn 3-540-66426-2Conference Paper

Automatic analysis of loops to exploit operator parallelism on reconfigurable systemsRAMASUBRAMANIAN, N; SUBRAMANIAN, R; PANDE, S et al.Lecture notes in computer science. 1999, pp 305-322, issn 0302-9743, isbn 3-540-66426-2Conference Paper

Compiling for SIMD Within a registerFISHER, R. J; DIETZ, H. G.Lecture notes in computer science. 1999, pp 290-304, issn 0302-9743, isbn 3-540-66426-2Conference Paper

Automatic parallelization of C by means of language transcriptionKENNELL, R. L; EIGENMANN, R.Lecture notes in computer science. 1999, pp 166-180, issn 0302-9743, isbn 3-540-66426-2Conference Paper

An integrated framework for compiler-directed Cache Coherence and data prefetchingLIM, H.-B; YEW, P.-C.Lecture notes in computer science. 1999, pp 51-67, issn 0302-9743, isbn 3-540-66426-2Conference Paper

Improving compiler and run-time support for irregular reductions using local writesHWANSOO HAN; TSENG, C.-W.Lecture notes in computer science. 1999, pp 181-196, issn 0302-9743, isbn 3-540-66426-2Conference Paper

Network-aware parallel computing with remosLOWEKAMP, B; MILLER, N; SUTHERLAND, D et al.Lecture notes in computer science. 1999, pp 100-119, issn 0302-9743, isbn 3-540-66426-2Conference Paper

Stampede: A programming system for emerging scalable interactive multimedia applicationsNIKHIL, R. S; RAMACHANDRAN, U; REHG, J. M et al.Lecture notes in computer science. 1999, pp 83-99, issn 0302-9743, isbn 3-540-66426-2Conference Paper

Considerations in HPJava language design and implementationGUANSONG ZHANG; CARPENTER, B; FOX, G et al.Lecture notes in computer science. 1999, pp 18-33, issn 0302-9743, isbn 3-540-66426-2Conference Paper

A loop transformation algorithm based on explicit data layout representation for optimizing localityKANDEMIR, M; RAMANUJAM, J; CHOUDHARY, A et al.Lecture notes in computer science. 1999, pp 34-50, issn 0302-9743, isbn 3-540-66426-2Conference Paper

HPF-2 support for dynamic sparse computationsASENJO, R; PLATA, O; TOURINO, J et al.Lecture notes in computer science. 1999, pp 230-246, issn 0302-9743, isbn 3-540-66426-2Conference Paper