Computational approaches to unveiling ancient genome duplicationsVAN DE PEER, Yves.Nature reviews. Genetics (Print). 2004, Vol 5, Num 10, pp 752-763, issn 1471-0056, 12 p.Article

Aflpinsilico, simulating AFLP fingerprintsROMBAUTS, Stephane; VAN DE PEER, Yves; ROUZE, Pierre et al.Bioinformatics (Oxford. Print). 2003, Vol 19, Num 6, pp 776-777, issn 1367-4803, 2 p.Article

Detecting the undetectable: uncovering duplicated segments in Arabidopsis by comparison with riceVANDEPOELE, Klaas; SIMILLION, Cedric; VAN DE PEER, Yves et al.Trends in genetics (Regular ed.). 2002, Vol 18, Num 12, pp 606-608, issn 0168-9525, 3 p.Article

Redundancy and rewiring of genetic networks following genome-wide duplication eventsDE SMET, Riet; VAN DE PEER, Yves.Current opinion in plant biology. 2012, Vol 15, Num 2, pp 168-176, issn 1369-5266, 9 p.Article

In search of the small ones : improved prediction of short exons in vertebrates, plants, fungi and protistsSAEYS, Yvan; ROUZE, Pierre; VAN DE PEER, Yves et al.Bioinformatics (Oxford. Print). 2007, Vol 23, Num 4, pp 414-420, issn 1367-4803, 7 p.Article

The small RNA world of plantsBONNET, Eric; VAN DE PEER, Yves; ROUZE, Pierre et al.New phytologist. 2006, Vol 171, Num 3, pp 451-468, issn 0028-646X, 18 p.Article

The evolutionary significance of ancient genome duplicationsVAN DE PEER, Yves; MAERE, Steven; MEYER, Axel et al.Nature reviews. Genetics (Print). 2009, Vol 10, Num 10, pp 725-732, issn 1471-0056, 8 p.Article

Exploring the plant transcriptome through phylogenetic profilingVANDEPOELE, Klaas; VAN DE PEER, Yves.Plant physiology (Bethesda). 2005, Vol 137, Num 1, pp 31-42, issn 0032-0889, 12 p.Article

Analysis of a Gibbs sampler method for model-based clustering of gene expression dataJOSHI, Anagha; VAN DE PEER, Yves; MICHOEL, Tom et al.Bioinformatics (Oxford. Print). 2008, Vol 24, Num 2, pp 176-183, issn 1367-4803, 8 p.Article

Functional divergence of proteins through frameshift mutationsRAES, Jeroen; VAN DE PEER, Yves.Trends in genetics (Regular ed.). 2005, Vol 21, Num 8, pp 428-431, issn 0168-9525, 4 p.Article

Comparative Network Analysis Reveals That Tissue Specificity and Gene Function Are Important Factors Influencing the Mode of Expression Evolution in Arabidopsis and RiceMOVAHEDI, Sara; VAN DE PEER, Yves; VANDEPOELE, Klaas et al.Plant physiology (Bethesda). 2011, Vol 156, Num 3, pp 1316-1330, issn 0032-0889, 15 p.Article

I-ADHoRe 2.0. an improved tool to detect degenerated genomic homology using genomic profilesSIMILLION, Cedric; JANSSENS, Koen; STERCK, Lieven et al.Bioinformatics (Oxford. Print). 2008, Vol 24, Num 1, pp 127-128, issn 1367-4803, 2 p.Article

Journey through the past: 150 million years of plant genome evolutionPROOST, Sebastian; PATTYN, Pedro; GERATS, Tom et al.Plant journal. 2011, Vol 66, Num 1, pp 58-65, issn 0960-7412, 8 p.Article

FunSiP : a modular and extensible classifier for the prediction of functional sites in DNAVAN BEL, Michiel; SAEYS, Yvan; VAN DE PEER, Yves et al.Bioinformatics (Oxford. Print). 2008, Vol 24, Num 13, pp 1532-1533, issn 1367-4803, 2 p.Article

Genome duplication and the origin of angiospermsDE BODT, Stefanie; MAERE, Steven; VAN DE PEER, Yves et al.Trends in ecology & evolution (Amsterdam). 2005, Vol 20, Num 11, pp 591-597, issn 0169-5347, 7 p.Article

Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequencesBONNET, Eric; WUYTS, Jan; ROUZE, Pierre et al.Bioinformatics (Oxford. Print). 2004, Vol 20, Num 17, pp 2911-2917, issn 1367-4803, 7 p.Article

TAPIR, a web server for the prediction of plant microRNA targets, including target mimicsBONNET, Eric; YING HE; BILLIAU, Kenny et al.Bioinformatics (Oxford. Print). 2010, Vol 26, Num 12, pp 1566-1568, issn 1367-4803, 3 p.Article

Computational approaches to identify promoters and cis-regulatory elements in plant genomesROMBAUTS, Stephane; FLORQUIN, Kobe; LESCOT, Magali et al.Plant physiology (Bethesda). 2003, Vol 132, Num 3, pp 1162-1176, issn 0032-0889, 15 p.Article

Unraveling Transcriptional Control in Arabidopsis Using cis-Regulatory Elements and Coexpression NetworksVANDEPOELE, Klaas; QUIMBAYA, Mauricio; CASNEUF, Tine et al.Plant physiology (Bethesda). 2009, Vol 150, Num 2, pp 535-546, issn 0032-0889, 12 p.Article

Canalization without flux sensors : a traveling-wave hypothesisMERKS, Roeland M. H; VAN DE PEER, Yves; INZK, Dirk et al.Trends in plant science. 2007, Vol 12, Num 9, pp 384-390, issn 1360-1385, 7 p.Article

Genome-wide characterization of the lignification toolbox in ArabidopsisRAES, Jeroen; ROHDE, Antje; CHRISTENSEN, Jørgen Holst et al.Plant physiology (Bethesda). 2003, Vol 133, Num 3, pp 1051-1071, issn 0032-0889, 21 p.Article

Robust biomarker identification for cancer diagnosis with ensemble feature selection methodsABEEL, Thomas; HELLEPUTTE, Thibault; VAN DE PEER, Yves et al.Bioinformatics (Oxford. Print). 2010, Vol 26, Num 3, pp 392-398, issn 1367-4803, 7 p.Article

How many genes are there in plants (... and why are they there)? : Gerome studies and molecular geneticsSTERCK, Lieven; ROMBAUTS, Stephane; VANDEPOELE, Klaas et al.Current opinion in plant biology. 2007, Vol 10, Num 2, pp 199-203, issn 1369-5266, 5 p.Article

SpliceMachine: predicting splice sites from high-dimensional local context representationsDEGROEVE, Sven; SAEYS, Yvan; DE BAETS, Bernard et al.Bioinformatics (Oxford. Print). 2005, Vol 21, Num 8, pp 1332-1338, issn 1367-4803, 7 p.Article

Module networks revisited : computational assessment and prioritization of model predictionsJOSHI, Anagha; DE SMET, Riet; MARCHAL, Kathleen et al.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 4, pp 490-496, issn 1367-4803, 7 p.Article