Profile Comparer : a program for scoring and aligning profile hidden Markov modelsMADERA, Martin.Bioinformatics (Oxford. Print). 2008, Vol 24, Num 22, pp 2630-2631, issn 1367-4803, 2 p.Article

VIPR HMM: a hidden Markov model for detecting recombination with microbial detection microarraysALLRED, Adam F; RENSHAW, Hilary; WEAVER, Scott et al.Bioinformatics (Oxford. Print). 2012, Vol 28, Num 22, pp 2922-2929, issn 1367-4803, 8 p.Article

Combined prediction of Tat and Sec signal peptides with hidden Markov modelsBAGOS, Pantelis G; NIKOLAOU, Elisanthi P; LIAKOPOULOS, Theodore D et al.Bioinformatics (Oxford. Print). 2010, Vol 26, Num 22, pp 2811-2817, issn 1367-4803, 7 p.Article

Augmented training of hidden Markov models to recognize remote homologs via simulated evolutionKUMAR, Anoop; COWEN, Lenore.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 13, pp 1602-1608, issn 1367-4803, 7 p.Article

Identification of genes involved in the same pathways using a Hidden Markov Model-based approachSENF, Alexander; CHEN, Xue-Wen.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 22, pp 2945-2954, issn 1367-4803, 10 p.Article

Incorporating sequence information into the scoring function : a hidden Markov model for improved peptide identificationKHATUN, Jainab; HAMLETT, Eric; GIDDINGS, Morgan C et al.Bioinformatics (Oxford. Print). 2008, Vol 24, Num 5, pp 674-681, issn 1367-4803, 8 p.Article

HMMGEP: clustering gene expression data using hidden Markov modelsXINGLAI JI; YUAN YUAN; LI-LING, Jesse et al.Bioinformatics (Oxford. Print). 2004, Vol 20, Num 11, pp 1799-1800, issn 1367-4803, 2 p.Article

Self-similar Layered hidden Markov ModelsADIBI, Jafar; SHEN, Wei-Min.Lecture notes in computer science. 2001, pp 1-15, issn 0302-9743, isbn 3-540-42534-9Conference Paper

Disease association tests by inferring ancestral haplotypes using a hidden markov modelSU, Shu-Yi; BALDING, David J; COIN, Lachlan J. M et al.Bioinformatics (Oxford. Print). 2008, Vol 24, Num 7, pp 972-978, issn 1367-4803, 7 p.Article

Predicting GPCR-G-protein coupling using hidden Markov modelsSREEKUMAR, Kodangattil R; YOUPING HUANG; PAUSCH, Mark H et al.Bioinformatics (Oxford. Print). 2004, Vol 20, Num 18, pp 3490-3499, issn 1367-4803, 10 p.Article

Multiple testing in genome-wide association studies via hidden Markov modelsZHI WEI; WENGUANG SUN; KAI WANG et al.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 21, pp 2802-2808, issn 1367-4803, 7 p.Article

COACH: profile-profile alignment of protein families using hidden Markov modelsEDGAR, Robert C; SJÖLANDER, Kimmen.Bioinformatics (Oxford. Print). 2004, Vol 20, Num 8, pp 1309-1318, issn 1367-4803, 10 p.Article

Speech recognition with hmm models for cochlear prosthesesSAKKA, Zied; KACHOURI, Abdennaceur; SAMET, Mounir et al.IEEE International conference on industria technologyl. 2004, isbn 0-7803-8662-0, 3Vol, Vol3, 1478-1481Conference Paper

SoDA2: a Hidden Markov Model approach for identification of immunoglobulin rearrangementsMUNSHAW, Supriya; KEPLER, Thomas B.Bioinformatics (Oxford. Print). 2010, Vol 26, Num 7, pp 867-872, issn 1367-4803, 6 p.Article

Modeling promoter grammars with evolving hidden Markov modelsWON, Kyoung-Jae; SANDELIN, Albin; MARSTRAND, Troels Torben et al.Bioinformatics (Oxford. Print). 2008, Vol 24, Num 15, pp 1669-1675, issn 1367-4803, 7 p.Article

Analyzing taxonomic classification using extensible Markov modelsKOTAMARTI, Rao M; HAHSLER, Michael; RAIFORD, Douglas et al.Bioinformatics (Oxford. Print). 2010, Vol 26, Num 18, pp 2235-2241, issn 1367-4803, 7 p.Article

Prediction of protein interdomain linker regions by a hidden markov modelBAE, Kyounghwa; MALLICK, Bani K; ELSIK, Christine G et al.Bioinformatics (Oxford. Print). 2005, Vol 21, Num 10, pp 2264-2270, issn 1367-4803, 7 p.Article

Learning object trajectory patterns by spectral clusteringPORIKLI, Fatih.IEEE International Conference on multimedia. 2004, isbn 0-7803-8603-5, 3Vol, vol2, 1171-1174Conference Paper

A hybrid approach to combine HMM and SVM methods for the prediction of the transmembrane spanning regionMIN KYUNG KIM; CHUL HWAN SONG; SEONG JOON YOO et al.Lecture notes in computer science. 2005, issn 0302-9743, isbn 3-540-28894-5, vol3, 792-798Conference Paper

Bibliographic component extraction using support vector machines and Hidden Markov modelsOKADA, Takashi; TAKASU, Atsuhiro; ADACHI, Jun et al.Lecture notes in computer science. 2004, pp 501-512, issn 0302-9743, isbn 3-540-23013-0, 12 p.Conference Paper

Developing competitive HMM PoS taggers using small training corporaPADRO, Muntsa; PADRO, Lluis.Lecture notes in computer science. 2004, pp 127-136, issn 0302-9743, isbn 3-540-23498-5, 10 p.Conference Paper

Hierarchical hidden Markov model with application to joint analysis of ChIP-chip and ChIP-seq dataCHOI, Hyungwon; NESVIZHSKII, Alexey I; GHOSH, Debashis et al.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 14, pp 1715-1721, issn 1367-4803, 7 p.Article

Using multi-data hidden Markov models trained on local neighborhoods of protein structure to predict residue-residue contactsBJÖRKHOLM, Patrik; DANILUK, Pawel; KRYSHTAFOVYCH, Andriy et al.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 10, pp 1264-1270, issn 1367-4803, 7 p.Article

On the redundancy of HMM patternsDHULIPALA, Anand K; ORLITSKY, Alon.IEEE International Symposium on Information Theory. 2004, isbn 0-7803-8280-3, 1Vol, p. 9Conference Paper

Multistate Markov models for disease progression with classification errorJACKSON, Christopher H; SHARPLES, Linda D; THOMPSON, Simon G et al.Statistician (London. Print). 2003, Vol 52, pp 193-209, issn 0039-0526, 17 p., 2Article