DERIVING CHEMOSENSITIVITY FROM CELL LINES: FORENSIC BIOINFORMATICS AND REPRODUCIBLE RESEARCH IN HIGH-THROUGHPUT BIOLOGYBAGGERLY, Keith A; COOMBES, Kevin R.The Annals of applied statistics. 2009, Vol 3, Num 4, pp 1309-1334, issn 1932-6157, 26 p.Article

Gene sequence signatures revealed by mining the UniGene affiliation networkJIEXIN ZHANG; LI ZHANG; COOMBES, Kevin R et al.Bioinformatics (Oxford. Print). 2006, Vol 22, Num 4, pp 385-391, issn 1367-4803, 7 p.Article

Gene expression profile of metastatic human pancreatic cancer cells depends on the organ microenvironmentNAKAMURA, Toru; FIDLER, Isaiah J; COOMBES, Kevin R et al.Cancer research (Baltimore). 2007, Vol 67, Num 1, pp 139-148, issn 0008-5472, 10 p.Article

Enrichment analysis in high-throughput genomics : accounting for dependency in the NULLGOLD, David L; COOMBES, Kevin R; JING WANG et al.Briefings in bioinformatics. 2007, Vol 8, Num 2, pp 71-77, issn 1467-5463, 7 p.Article

Reproducibility of SELDI-TOF protein patterns in serum: comparing datasets from different experimentsBAGGERLY, Keith A; MORRIS, Jeffrey S; COOMBES, Kevin R et al.Bioinformatics (Oxford. Print). 2004, Vol 20, Num 5, pp 777-785, issn 1367-4803, 9 p.Article

Cancer genomics : Promises and complexitiesWEI ZHANG; LABORDE, Pilar M; COOMBES, Kevin R et al.Clinical cancer research. 2001, Vol 7, Num 8, pp 2159-2167, issn 1078-0432Article

Variable slope normalization of reverse phase protein arraysSHANNON NEELEY, E; KORNBLAU, Steven M; COOMBES, Kevin R et al.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 11, pp 1384-1389, issn 1367-4803, 6 p.Article

Highly Phosphorylated FOXO3A Is an Adverse Prognostic Factor in Acute Myeloid LeukemiaKORNBLAU, Steven M; SINGH, Neera; YIHUA QIU et al.Clinical cancer research (Print). 2010, Vol 16, Num 6, pp 1865-1874, issn 1078-0432, 10 p.Article

Relax with CouchDB — Into the non-relational DBMS era of bioinformaticsMANYAM, Ganiraju; PAYTON, Michelle A; ROTH, Jack A et al.Genomics (San Diego, Calif.). 2012, Vol 100, Num 1, pp 1-7, issn 0888-7543, 7 p.Article

Analysis of dose-response effects on gene expression data with comparison of two microarray platformsJIANHUA HU; KAPOOR, Mini; WEI ZHANG et al.Bioinformatics (Oxford. Print). 2005, Vol 21, Num 17, pp 3524-3529, issn 1367-4803, 6 p.Article

Synergistic Targeting of AML Stem/Progenitor Cells With IAP Antagonist Birinapant and Demethylating AgentsCARTER, Bing Z; PO YEE MAK; JACAMO, Rodrigo O et al.Journal of the National Cancer Institute. 2014, Vol 106, Num 2, issn 0027-8874, 1.1-1.12Article

An Epithelial―Mesenchymal Transition Gene Signature Predicts Resistance to EGFR and PI3K Inhibitors and Identifies Axl as a Therapeutic Target for Overcoming EGFR Inhibitor ResistanceAVERETT BYERS, Lauren; LIXIA DIAO; NILSSON, Monique B et al.Clinical cancer research (Print). 2013, Vol 19, Num 1, pp 279-290, issn 1078-0432, 12 p.Article

MiRNA EXPRESSION PROFILES IN HEAD AND NECK SQUAMOUS CELL CARCINOMA AND ADJACENT NORMAL TISSUERAMDAS, Latha; GIRI, Uma; ASHORN, Cheryl L et al.Head & neck. 2009, Vol 31, Num 5, pp 642-654, issn 1043-3074, 13 p.Article

Plasma protein profiling for diagnosis of pancreatic cancer reveals the presence of host response proteinsKOOMEN, John M; SHIH, Lichen Nancy; COOMBES, Kevin R et al.Clinical cancer research. 2005, Vol 11, Num 3, pp 1110-1118, issn 1078-0432, 9 p.Article

Melanoma antigen family A identified by the bimodality index defines a subset of triple negative breast cancers as candidates for immune response augmentationKARN, Thomas; PUSZTAI, Lajos; HANKER, Lars et al.European journal of cancer (1990). 2012, Vol 48, Num 1, pp 12-23, issn 0959-8049, 12 p.Article

PrepMS : TOF MS data graphical preprocessing toolKARPIEVITCH, Yuliya V; HILL, Elizabeth G; SMOLKA, Adam J et al.Bioinformatics (Oxford. Print). 2007, Vol 23, Num 2, pp 264-265, issn 1367-4803, 2 p.Article

Serum amyloid A as a tumor marker in sera of nude mice with orthotopic human pancreatic cancer and in plasma of patients with pancreatic cancerYOKOI, Kenji; SHIH, Li-Chen Nancy; KOBAYASHI, Ryuji et al.International journal of oncology. 2005, Vol 27, Num 5, pp 1361-1369, issn 1019-6439, 9 p.Article

Signal in noise: Evaluating reported reproducibility of serum proteomic tests for ovarian cancer. Commentary. ControversyBAGGERLY, Keith A; MORRIS, Jeffrey S; PETRICOIN, Emanuel F et al.Journal of the National Cancer Institute. 2005, Vol 97, Num 4, pp 307-319, issn 0027-8874, 13 p.Article

Association between ductal fluid proteomic expression profiles and the presence of lymph node metastases in women with breast cancerKUERER, Henry M; COOMBES, Kevin R; CHEN, Jeng-Neng et al.Surgery. 2004, Vol 136, Num 5, pp 1061-1069, issn 0039-6060, 9 p.Article

A comprehensive approach to the analysis of matrix-assisted laser desorption/ionization-time of flight proteomics spectra from serum samples : Mining MALDI-TOF dataBAGGERLY, Keith A; MORRIS, Jeffrey S; JING WANG et al.Proteomics (Weinheim. Print). 2003, Vol 3, Num 9, pp 1667-1672, issn 1615-9853, 6 p.Article

Effect of KRAS Oncogene Substitutions on Protein Behavior: Implications for Signaling and Clinical OutcomeIHLE, Nathan T; BYERS, Lauren A; LIXIA DIAO et al.Journal of the National Cancer Institute. 2012, Vol 104, Num 3, pp 228-239, issn 0027-8874, 12 p.Article

Survivin is highly expressed in CD34⁺38^― leukemic stem/progenitor cells and predicts poor clinical outcomes in AMLCARTER, Bing Z; YIHUA QIU; MILLS, Gordon B et al.Blood. 2012, Vol 120, Num 1, pp 173-180, issn 0006-4971, 8 p.Article

Role of Peroxisome Proliferator-Activated Receptor-y and Its Coactivator DRIP205 in Cellular Responses to CDDO (RTA-401) in Acute Myelogenous LeukemiaTSAO, Twee; KORNBLAU, Steven; SCHOBER, Wendy et al.Cancer research (Chicago, Ill.). 2010, Vol 70, Num 12, pp 4949-4960, issn 0008-5472, 12 p.Article

Non-parametric quantification of protein lysate arraysJIANHUA HU; XUMING HE; BAGGERLY, Keith A et al.Bioinformatics (Oxford. Print). 2007, Vol 23, Num 15, pp 1986-1994, issn 1367-4803, 9 p.Article

Significant differences in nipple aspirate fluid protein expression between healthy women and those with breast cancer demonstrated by time-of-flight mass spectrometryPAWLIK, Timothy M; FRITSCHE, Herbert; HUNG, Mien-Chie et al.Breast cancer research and treatment. 2005, Vol 89, Num 2, pp 149-157, issn 0167-6806, 9 p.Article