Assembly, Gene Annotation and Marker Development Using 454 Floral Transcriptome Sequences in Ziziphus Celata (Rhamnaceae), a Highly Endangered, Florida Endemic PlantEDWARDS, Christine E; PARCHMAN, Thomas L; WEEKLEY, Carl W et al.DNA research. 2012, Vol 19, Num 1, pp 1-9, issn 1340-2838, 9 p.Article

Discovery and mapping of a new expressed sequence tag-single nucleotide polymorphism and simple sequence repeat panel for large-scale genetic studies and breeding of Theobroma cacao LALLEGRE, Iviathilde; ARGOUT, Xavier; COURTOIS, Brigitte et al.DNA research. 2012, Vol 19, Num 1, pp 23-35, issn 1340-2838, 13 p.Article

External Light Conditions and Internal Cell Cycle Phases Coordinate Accumulation of Chloroplast and Mitochondrial Transcripts in the Red Alga Cyanidioschyzon merolaeKANESAKI, Yu; IMAMURA, Sousuke; MINODA, Ayumi et al.DNA research. 2012, Vol 19, Num 3, pp 289-303, issn 1340-2838, 15 p.Article

Identification of Substrain-Specific Mutations by Massively Parallel Whole-Genome Resequencing of Synechocystis sp. PCC 6803KANESAKI, Yu; SHIWA, Yuh; TAJIMA, Naoyuki et al.DNA research. 2012, Vol 19, Num 1, pp 67-79, issn 1340-2838, 13 p.Article

Mate Pair Sequencing of Whole-Genome-Amplified DNA Following Laser Capture Microdissection of Prostate CancerMURPHY, Stephen J; CHEVILLE, John C; ZAREI, Shabnam et al.DNA research. 2012, Vol 19, Num 5, pp 395-406, issn 1340-2838, 12 p.Article

Mobilizing the Genome of Lepidoptera through Novel Sequence Gains and End Creation by Non-autonomous Lep1 HelitronsCOATES, Brad S; HELLMICH, Richard L; GRANT, David M et al.DNA research. 2012, Vol 19, Num 1, pp 11-21, issn 1340-2838, 11 p.Article

Phylogeny of Galactolipid Synthase Homologs Together with their Enzymatic Analyses Revealed a Possible Origin and Divergence Time for Photosynthetic Membrane BiogenesisYUZAWA, Yuichi; NISHIHARA, Hidenori; HARAGUCHI, Tsuyoshi et al.DNA research. 2012, Vol 19, Num 1, pp 91-102, issn 1340-2838, 12 p.Article

Large-Scale Development of Cost-Effective Single-Nucleotide Polymorphism Marker Assays for Genetic Mapping in Pigeonpea and Comparative Mapping in LegumesSAXENA, Rachit K; VARMA PENMETSA, R; COOK, Douglas R et al.DNA research. 2012, Vol 19, Num 6, pp 449-461, issn 1340-2838, 13 p.Article

Universal Pattern and Diverse Strengths of Successive Synonymous Codon Bias in Three Domains of Life, Particularly Among Prokaryotic GenomesGUO, Feng-Biao; YE, Yuan-Nong; ZHAO, Hai-Long et al.DNA research. 2012, Vol 19, Num 6, pp 477-485, issn 1340-2838, 9 p.Article

De Novo Assembly of Chickpea Transcriptome Using Short Reads for Gene Discovery and Marker IdentificationGARG, Rohini; PATEL, Ravi K; TYAGI, Akhilesh K et al.DNA research. 2011, Vol 18, Num 1, pp 53-63, issn 1340-2838, 11 p.Article

In silico Analysis of 3'-End-Processing Signals in Aspergillus oryzae Using Expressed Sequence Tags and Genomic Sequencing DataTANAKA, Mizuki; SAKAI, Yoshifumi; YAMADA, Osamu et al.DNA research. 2011, Vol 18, Num 3, pp 189-200, issn 1340-2838, 12 p.Article

Pseudo-Response Regulator (PRR) Homologues of the Moss Physcomitrella patens: Insights into the Evolution of the PRR Family in Land PlantsSATBHAI, Santosh B; YAMASHINO, Takafumi; OKADA, Ryo et al.DNA research. 2011, Vol 18, Num 1, pp 39-52, issn 1340-2838, 14 p.Article

The Complete Chloroplast Genome of 1 7 Individuals of Pest Species JACObaea vulgaris: SNPs, Microsatellites and Barcoding Markers for Population and Phylogenetic StudiesDOORDUIN, Leonie; DOORDUIN, Barbara; LAMMERS, Youri et al.DNA research. 2011, Vol 18, Num 2, pp 93-105, issn 1340-2838, 13 p.Article

Polycomb Group-Dependent, Heterochromatin Protein 1-Independent, Chromatin Structures Silence Retrotransposons in Somatic Tissues Outside OvariesDUFOURT, J; BRASSET, E; DESSET, S et al.DNA research. 2011, Vol 18, Num 6, pp 451-461, issn 1340-2838, 11 p.Article

High-Resolution Characterization of Toxoplasma gondii Transcriptome with a Massive Parallel Sequencing MethodtYAMAGISHI, Junya; WAKAGURI, Hiroyuki; WATANABE, Junichi et al.DNA research. 2010, Vol 17, Num 4, pp 233-243, issn 1340-2838, 11 p.Article

Relative Codon Adaptation: A Generic Codon Bias Index for Prediction of Gene ExpressionFOX, Jesse M; ERILL, Ivan.DNA research. 2010, Vol 17, Num 3, pp 185-196, issn 1340-2838, 12 p.Article

Conservation, Rearrangement, and Deletion of Gene Pairs During the Evolution of Four Grass GenomesKROM, Nicholas; RAMAKRISHNA, Wusirika.DNA research. 2010, Vol 17, Num 6, pp 343-352, issn 1340-2838, 10 p.Article

Genome-Wide Analysis of Two-Component Systems and Prediction of Stress-Responsive Two-Component System Members in SoybeanMOCHIDA, Keiichi; YOSHIDA, Takuhiro; SAKURAI, Tetsuya et al.DNA research. 2010, Vol 17, Num 5, pp 303-324, issn 1340-2838, 22 p.Article

Cluster Analysis and Comparison of Various Chloroplast Transcriptomes and Genes in Arabidopsis thalianaWON KYONG CHO; GEIMER, Simon; MEURER, Jörg et al.DNA research. 2009, Vol 16, Num 1, pp 31-44, issn 1340-2838, 14 p.Article

Development of Genome-wide Simple Sequence Repeat Markers Using Whole-genome Shotgun Sequences of Sorghum (Sorghum bicolor (L.) Moench)JUN-ICHI, Yonemaru; TSUYU, Ando; TATSUMI, Mizubayashi et al.DNA research. 2009, Vol 16, Num 3, pp 187-193, issn 1340-2838, 7 p.Article

Comparative Genome Analysis of Lactobacillus reuteri and Lactobacillus fermentum Reveal a Genomic Island for Reuterin and Cobalamin ProductionMORITA, Hidetoshi; TOH, Hidehiro; FUKUOKA, Hideo et al.DNA research. 2008, Vol 15, Num 3, pp 151-161, issn 1340-2838, 11 p.Article

Enhanced Recombinant Protein Productivity by Genome Reduction in Bacillus subtilisMORIMOTO, Takuya; KADOYA, Ryosuke; MANABE, Kenji et al.DNA research. 2008, Vol 15, Num 2, pp 73-81, issn 1340-2838, 9 p.Article

Fine Expression Profiling of Full-length Transcripts using a Size-unbiased cDNA Library Prepared with the Vector-capping MethodOSHIKAWA, Mio; SUGAI, Yoshiko; USAMI, Ron et al.DNA research. 2008, Vol 15, Num 3, pp 123-136, issn 1340-2838, 14 p.Article

Focused Microarray Analysis of Peripheral Mononuclear Blood Cells from churg-Strauss Syndrome PatientsTOUCAN, Takahiro; ONDA, Hiroaki; OKUZAKI, Daisuke et al.DNA research. 2008, Vol 15, Num 2, pp 103-114, issn 1340-2838, 12 p.Article

A genome-wide survey and systematic RNAi-based characterization of helicase-like genes in Caenorhabditis elegansEKI, Toshihiko; ISHIHARA, Takeshi; KATSURA, Isao et al.DNA research. 2007, Vol 14, Num 4, pp 183-199, issn 1340-2838, 17 p.Article