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Hub genes with positive feedbacks function as master switches in developmental gene regulatory networksSEO, Chang H; KIM, Jeong-Rae; KIM, Man-Sun et al.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 15, pp 1898-1904, issn 1367-4803, 7 p.Article

Synchronous versus asynchronous modeling of gene regulatory networksGARG, Abhishek; DI CARA, Alessandro; XENARIOS, Ioannis et al.Bioinformatics (Oxford. Print). 2008, Vol 24, Num 17, pp 1917-1925, issn 1367-4803, 9 p.Article

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Forward engineering of synthetic bio-logical AND gatesIYER RAMALINGAM, Kavita; TOMSHINE, Jonathan R; MAYNARD, Jennifer A et al.Biochemical engineering journal. 2009, Vol 47, Num 1-3, pp 38-47, issn 1369-703X, 10 p.Article

Computational methods for discovering gene networks from expression dataLEE, Wei-Po; TZOU, Wen-Shyong.Briefings in bioinformatics. 2009, Vol 10, Num 4, pp 408-423, issn 1467-5463, 16 p.Article

A systems biology approach to developmental toxicologyCUMMINGS, Audrey; KAVLOCK, Robert.Reproductive toxicology (Elmsford, NY). 2005, Vol 19, Num 3, pp 281-290, issn 0890-6238, 10 p.Article

Identification of context-specific gene regulatory networks with GEMULA—gene expression modeling using LAssoGEEVEN, Geert; VAN KESTEREN, Ronald E; SMIT, August B et al.Bioinformatics (Oxford. Print). 2012, Vol 28, Num 2, pp 214-221, issn 1367-4803, 8 p.Article

Learning Bayesian networks with integration of indirect prior knowledgeBAIKANG PEI; ROWE, David W; SHIN, Dong-Guk et al.International journal of data mining and bioinformatics (Print). 2010, Vol 4, Num 5, pp 505-519, issn 1748-5673, 15 p.Article

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Periodic Orbits and Equilibria in Glass Models for Gene Regulatory NetworksZINOVIK, Igor; CHEBIRYAK, Yury; KROENING, Daniel et al.IEEE transactions on information theory. 2010, Vol 56, Num 2, pp 805-820, issn 0018-9448, 16 p.Article

Molecular mechanisms of yeast tolerance and in situ detoxification of lignocellulose hydrolysatesLIU, Z. Lewis.Applied microbiology and biotechnology. 2011, Vol 90, Num 3, pp 809-825, issn 0175-7598, 17 p.Article

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Solving chemical master equations by adaptive wavelet compressionJAHNKE, Tobias; UDRESCU, Tudor.Journal of computational physics (Print). 2010, Vol 229, Num 16, pp 5724-5741, issn 0021-9991, 18 p.Article

Whole Genome Expression Profiling Reveals a Significant Role for the Cell Junction and Apoptosis Pathways in Breast Cancer Stem CellsMINGZHU HUANG; YUQING LI; GUOHUA WU et al.Molecular biotechnology. 2010, Vol 45, Num 1, pp 39-48, issn 1073-6085, 10 p.Article

Building gene networks with time-delayed regulations : Pattern recognition in bioinformaticsCHATURVEDI, Iti; RAJAPAKSE, Jagath C.Pattern recognition letters. 2010, Vol 31, Num 14, pp 2133-2137, issn 0167-8655, 5 p.Article

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Sex-dependent gene regulatory networks of the heart rhythmIACOBAS, D. A; IACOBAS, S; THOMAS, N et al.Functional & integrative genomics (Print). 2010, Vol 10, Num 1, pp 73-86, issn 1438-793X, 14 p.Article

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Implementation of a regulatory gene network to simulate the TH1/2 differentiation in an agent-based model of hypersensitivity reactionsSANTONI, Daniele; PEDICINI, Marco; CASTIGLIONE, Filippo et al.Bioinformatics (Oxford. Print). 2008, Vol 24, Num 11, pp 1374-1380, issn 1367-4803, 7 p.Article

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