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Adaptive evolution of the Retinoid X receptor in vertebratesPHILIP, Siby; CASTRO, L. Filipe C; DA FONSECA, Rute R et al.Genomics (San Diego, Calif.). 2012, Vol 99, Num 2, pp 81-89, issn 0888-7543, 9 p.Article

CACG: A database for comparative analysis of conjoined genesKIM, Dae-Soo; KIM, Dong-Wook; KIM, Min-Young et al.Genomics (San Diego, Calif.). 2012, Vol 100, Num 1, pp 14-17, issn 0888-7543, 4 p.Article

Contribution of lateral gene transfer to the gene repertoire of a gut-adapted methanogenLURIE-WEINBERGER, Mor N; PEERI, Michael; GOPHNA, Uri et al.Genomics (San Diego, Calif.). 2012, Vol 99, Num 1, pp 52-58, issn 0888-7543, 7 p.Article

Involvement of AmphiREL, a Rel-like gene identified in Brachiastoma belcheri, in LPS-induced response: Implication for evolution of Rel subfamily genesXIAOJUN SONG; PING JIN; JING HU et al.Genomics (San Diego, Calif.). 2012, Vol 99, Num 6, pp 361-369, issn 0888-7543, 9 p.Article

MiRANN: A reliable approach for improved classification of precursor microRNA using Artificial Neural Network modelEAMINRAHMAN, Md; ISLAM, Rashedul; ISLAM, Shahidul et al.Genomics (San Diego, Calif.). 2012, Vol 99, Num 4, pp 189-194, issn 0888-7543, 6 p.Article

Pathway-directed weighted testing procedures for the integrative analysis of gene expression and metabolomic dataPOISSON, Laila M; SREEKUMAR, Arun; CHINNAIYAN, Arul M et al.Genomics (San Diego, Calif.). 2012, Vol 99, Num 5, pp 265-274, issn 0888-7543, 10 p.Article

Profiling the metatranscriptome of the protistan community in Coptotermes formosanus with emphasis on the lignocellulolytic systemLEI XIE; LEI ZHANG; YI ZHONG et al.Genomics (San Diego, Calif.). 2012, Vol 99, Num 4, pp 246-255, issn 0888-7543, 10 p.Article

Relax with CouchDB — Into the non-relational DBMS era of bioinformaticsMANYAM, Ganiraju; PAYTON, Michelle A; ROTH, Jack A et al.Genomics (San Diego, Calif.). 2012, Vol 100, Num 1, pp 1-7, issn 0888-7543, 7 p.Article

Statistics of N-terminal alignment as a guide for refining prokaryotic gene annotationSATO, Naoki; TAJIMA, Naoyuki.Genomics (San Diego, Calif.). 2012, Vol 99, Num 3, pp 138-143, issn 0888-7543, 6 p.Article

The role of upregulated miRNAs and the identification of novel mRNA targets in prostatospheresCABARCAS, Stephanie M; THOMAS, Suneetha; XIAOHU ZHANG et al.Genomics (San Diego, Calif.). 2012, Vol 99, Num 2, pp 108-117, issn 0888-7543, 10 p.Article

CpG island structure and trithorax/polycomb chromatin domains in human cellsORLANDO, David A; GUENTHER, Matthew G; FRAMPTON, Garrett M et al.Genomics (San Diego, Calif.). 2012, Vol 100, Num 5, pp 320-326, issn 0888-7543, 7 p.Article

Discovery and characterization of new transcripts from RNA-seq data in mouse CD4 + T cellsHUTCHINS, Andrew Paul; POULAIN, Stephane; FUJII, Hodaka et al.Genomics (San Diego, Calif.). 2012, Vol 100, Num 5, pp 303-313, issn 0888-7543, 11 p.Article

Expansion of transducin subunit gene families in early vertebrate tetraploidizationsLAGMAN, David; SUNDSTRÖM, Görel; OCAMPO DAZA, Daniel et al.Genomics (San Diego, Calif.). 2012, Vol 100, Num 4, pp 203-211, issn 0888-7543, 9 p.Article

Improved variation calling via an iterative backbone remapping and local assembly method for bacterial genomesTAE, Hongseok; SETTLAGE, Robert E; SHALLOM, Shamira et al.Genomics (San Diego, Calif.). 2012, Vol 100, Num 5, pp 271-276, issn 0888-7543, 6 p.Article

A functional in vivo screen for regulators of tumor progression identifies HOXB2 as a regulator of tumor growth in breast cancerBOIMEL, Pamela J; CRUZ, Cristian; SEGALL, Jeffrey E et al.Genomics (San Diego, Calif.). 2011, Vol 98, Num 3, pp 164-172, issn 0888-7543, 9 p.Article

A nonsense mutation in the optic atrophy 3 gene (OPA3) causes dilated cardiomyopathy in Red Holstein cattleOWCZAREK-LIPSKA, Marta; PLATTET, Philippe; ZIPPERLE, Ljerka et al.Genomics (San Diego, Calif.). 2011, Vol 97, Num 1, pp 51-57, issn 0888-7543, 7 p.Article

Btrim: A fast, lightweight adapter and quality trimming program for next-generation sequencing technologiesYONG KONG.Genomics (San Diego, Calif.). 2011, Vol 98, Num 2, pp 152-153, issn 0888-7543, 2 p.Article

Coexistence of different base periodicities in prokaryotic genomes as related to DNA curvature, supercoiling, and transcriptionKRAVATSKAYA, G. I; KRAVATSKY, Y. V; CHECHETKIN, V. R et al.Genomics (San Diego, Calif.). 2011, Vol 98, Num 3, pp 223-231, issn 0888-7543, 9 p.Article

C―T variant in a miRNA target site of BCL2 is associated with increased risk of human papilloma virus related cervical cancer—An in silico approachRESHMI, G; SURYA, Ramachandran; JISSA, V. T et al.Genomics (San Diego, Calif.). 2011, Vol 98, Num 3, pp 189-193, issn 0888-7543, 5 p.Article

Effect of iodine on early stage thyroid autonomyMÜLLER, Kathrin; KROHN, Knut; ESZLINGER, Markus et al.Genomics (San Diego, Calif.). 2011, Vol 97, Num 2, pp 94-100, issn 0888-7543, 7 p.Article

Evaluation of microsatellite variation in the 1000 Genomes Project pilot studies is indicative of the quality and utility of the raw data and alignmentsMCIVER, L. J; FONDON, J. W; SKINNER, M. A et al.Genomics (San Diego, Calif.). 2011, Vol 97, Num 4, pp 193-199, issn 0888-7543, 7 p.Article

Gene conversions in the growth hormone gene family of primates: Stronger homogenizing effects in the Hominidae lineagePETRONELLA, Nicholas; DROUIN, Guy.Genomics (San Diego, Calif.). 2011, Vol 98, Num 3, pp 173-181, issn 0888-7543, 9 p.Article

Gene set analysis of genome-wide association studies: Methodological issues and perspectivesLILY WANG; PEILIN JIA; WOLFINGER, Russell D et al.Genomics (San Diego, Calif.). 2011, Vol 98, Num 1, pp 1-8, issn 0888-7543, 8 p.Article

Genome-wide association study of copy number variations associated with pulmonary function measures in Korea Associated Resource (KARE) cohortsLEE, Bo-Young; CHO, Seoae; DONG HYUN SHIN et al.Genomics (San Diego, Calif.). 2011, Vol 97, Num 2, pp 101-105, issn 0888-7543, 5 p.Article

Genomic evolution in domestic cattle: Ancestral haplotypes and healthy beefWILLIAMSON, Joseph F; STEELE, Edward J; LESTER, Susan et al.Genomics (San Diego, Calif.). 2011, Vol 97, Num 5, pp 304-312, issn 0888-7543, 9 p.Article

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