Interpolated variable order motifs for identification of horizontally acquired DNA : revisiting the Salmonella pathogenicity islandsVERNIKOS, Georgios S; PARKHILL, Julian.Bioinformatics (Oxford. Print). 2006, Vol 22, Num 18, pp 2196-2203, issn 1367-4803, 8 p.Article

The Burkholderia cepacia epidemic strain marker is part of a novel genomic island encoding both virulence and metabolism-associated genes in Burkholderia cenocepaciaBALDWIN, Adam; SOKOL, Pamela A; PARKHILL, Julian et al.Infection and immunity. 2004, Vol 72, Num 3, pp 1537-1547, issn 0019-9567, 11 p.Article

DNAPlotter : circular and linear interactive genome visualizationCARVER, Tim; THOMSON, Nick; BLEASBY, Alan et al.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 1, pp 119-120, issn 1367-4803, 2 p.Article

The pCoo plasmid of enterotoxigenic Escherichia coli is a mosaic cointegrateFROEHLICH, Barbara; PARKHILL, Julian; SANDERS, Mandy et al.Journal of bacteriology. 2005, Vol 187, Num 18, pp 6509-6516, issn 0021-9193, 8 p.Article

BamView: viewing mapped read alignment data in the context of the reference sequenceCARVER, Tim; BÖHME, Ulrike; OTTO, Thomas D et al.Bioinformatics (Oxford. Print). 2010, Vol 26, Num 5, pp 676-677, issn 1367-4803, 2 p.Article

The Flag-2 locus, an ancestral gene cluster, is potentially associated with a novel flagellar system from Escherichia coli. CommentaryREN, Chuan-Peng; BEATSON, Scott A; PARKHILL, Julian et al.Journal of bacteriology. 2005, Vol 187, Num 4, pp 1207-1209, issn 0021-9193, 14 p.Article

Artemis: an integrated platform for visualization and analysis of high-throughput sequence-based experimental dataCARVER, Tim; HARRIS, Simon R; BERRIMAN, Matthew et al.Bioinformatics (Oxford. Print). 2012, Vol 28, Num 4, pp 464-469, issn 1367-4803, 6 p.Article

Proteomic and microarray characterization of the AggR regulon identifies a pheU pathogenicity island in enteroaggregative Escherichia coliDUDLEY, Edward G; THOMSON, Nicholas R; PARKHILL, Julian et al.Molecular microbiology (Print). 2006, Vol 61, Num 5, pp 1267-1282, issn 0950-382X, 16 p.Article

Sequence and Analysis of a Plasmid-Encoded Mercury Resistance Operon from Mycobacterium marinum Identifies MerH, a New Mercuric Ion TransporterSCHUE, Mathieu; DOVER, Lynn G; BESRA, Gurdyal. S et al.Journal of bacteriology. 2009, Vol 191, Num 1, pp 439-444, issn 0021-9193, 6 p.Article

Rapid Bacterial Whole-Genome Sequencing to Enhance Diagnostic and Public Health MicrobiologyREUTER, Sandra; ELLINGTON, Matthew J; PARKHILL, Julian et al.JAMA internal medicine (Print). 2013, Vol 173, Num 15, pp 1397-1404, issn 2168-6106, 8 p.Article

Evolution of the Rhodococcus equi vap Pathogenicity Island Seen through Comparison of Host-Associated vapA and vapB Virulence PlasmidsLETEK, Michal; OCAMPO-SOSA, Alain A; BENTLEY, Stephen et al.Journal of bacteriology. 2008, Vol 190, Num 17, pp 5797-5805, issn 0021-9193, 9 p.Article

Complete genome of acute rheumatic fever-associated serotype M5 Streptococcus pyogenes strain manfredoHOLDEN, Matthew T. G; SCOTT, Annabel; JAGELS, Kay et al.Journal of bacteriology. 2007, Vol 189, Num 4, pp 1473-1477, issn 0021-9193, 5 p.Conference Paper

Analysis of Campylobacter jejuni capsular loci reveals multiple mechanisms for the generation of structural diversity and the ability to form complex heptosesKARLYSHEV, Andrey V; CHAMPION, Olivia L; GOODHEAD, Ian et al.Molecular microbiology (Print). 2005, Vol 55, Num 1, pp 90-103, issn 0950-382X, 14 p.Article

Integration of tools and resources for display and analysis of genomic data for protozoan parasitesASLETT, Martin; MOONEY, Paul; WOOD, Valerie et al.International journal for parasitology. 2005, Vol 35, Num 5, pp 481-493, issn 0020-7519, 13 p.Article

Variation in the effectors of the type III secretion system among Photorhabdus species as revealed by genomic analysisBRUGIRARD-RICAUD, Karine; GIVAUDAN, Alain; PARKHILL, Julian et al.Journal of bacteriology. 2004, Vol 186, Num 13, pp 4376-4381, issn 0021-9193, 6 p.Article

Multiple inverted DNA repeats of Bacteroides fragilis that control polysaccharide antigenic variation are similar to the hin region inverted repeats of Salmonella typhimuriumPATRICK, Sheila; PARKHILL, Julian; MCCOY, Lisa J et al.Microbiology (Reading). 2003, Vol 149, pp 915-924, issn 1350-0872, 10 p., 4Article

Bacillary dysentery from World War 1 and NCTC1, the first bacterial isolate in the National CollectionMATHER, Alison E; BAKER, Kate S; MCGREGOR, Hannah et al.Lancet (British edition). 2014, Vol 384, Num 9955, issn 0140-6736, p. 1720Article

Progressive genome-wide introgression in agricultural Campylobacter coliSHEPPARD, Samuel K; DIDELOT, Xavier; OGDEN, Iain D et al.Molecular ecology. 2013, Vol 22, Num 4, pp 1051-1064, issn 0962-1083, 14 p.Article

Structure, Diversity, and Mobility of the Salmonella Pathogenicity Island 7 Family of Integrative and Conjugative Elements within EnterobacteriaceaeSETH-SMITH, Helena M. B; FOOKES, Maria C; HARMSE, Johan et al.Journal of bacteriology. 2012, Vol 194, Num 6, pp 1494-1504, issn 0021-9193, 11 p.Article

Genome Sequence of a Recently Emerged, Highly Transmissible, Multi-Antibiotic- and Antiseptic-Resistant Variant of Methicillin-Resistant Staphylococcus aureus, Sequence Type 239 (TW)HOLDER, Matthew T. G; LINDSAY, Jodi A; CORTON, Craig et al.Journal of bacteriology. 2010, Vol 192, Num 3, pp 888-892, issn 0021-9193, 5 p.Article

Comparative cell wall core biosynthesis in the mycolated pathogens, Mycobacterium tuberculosis and Corynebacterium diphtheriaeDOVER, Lynn G; CERDENO-TARRAGA, Ana M; PALLEN, Mark J et al.FEMS microbiology reviews. 2004, Vol 28, Num 2, pp 225-250, issn 0168-6445, 26 p.Article

Tyrosine site-specific recombinases mediate DNA inversions affecting the expression of outer surface proteins of Bacteroides fragilisWEINACHT, Katja G; ROCHE, Hazeline; KRINOS, Corinna M et al.Molecular microbiology (Print). 2004, Vol 53, Num 5, pp 1319-1330, issn 0950-382X, 12 p.Article

Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchisepticaPARKHILL, Julian; SEBAIHIA, Mohammed; CERDENO-TARRAGA, Ana M et al.Nature genetics. 2003, Vol 35, Num 1, pp 32-40, issn 1061-4036, 9 p.Article

Complete sequence and organization of pbtoxis, the toxin-coding plasmid of Bacillus thuringiensis subsp. israelensisBERRY, Colin; O'NEIL, Susan; BEN-DOV, Eitan et al.Applied and environmental microbiology (Print). 2002, Vol 68, Num 10, pp 5082-5095, issn 0099-2240, 14 p.Article

Fibrinogen-binding and platelet-aggregation activities of a Lactobacillus salivarius septicaemia isolate are mediated by a novel fibrinogen-binding proteinCOLLINS, James; PIJKEREN, Jan-Peter Van; SHANNON, Oonagh et al.Molecular microbiology (Print). 2012, Vol 85, Num 5, pp 862-877, issn 0950-382X, 16 p.Article