FRANz: reconstruction of wild multi-generation pedigreesRIESTER, Markus; STADLER, Peter F; KLEMM, Konstantin et al.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 16, pp 2134-2139, issn 1367-4803, 6 p.Article

Combinatorial landscapesREIDYS, Christian M; STADLER, Peter F.SIAM review (Print). 2002, Vol 44, Num 1, pp 3-54, issn 0036-1445Article

SnoReport : computational identification of snoRNAs with unknown targetsHERTEL, Jana; HOFACKER, Ivo L; STADLER, Peter F et al.Bioinformatics (Oxford. Print). 2008, Vol 24, Num 2, pp 158-164, issn 1367-4803, 7 p.Article

Evolving towards the hypercycle : A spatial model of molecular evolutionSTEPHAN-OTTO ATTOLINI, Camille; STADLER, Peter F.Physica. D. 2006, Vol 217, Num 2, pp 134-141, issn 0167-2789, 8 p.Article

Explicit collision simulation of chemical reactions in a graph based artificial chemistryBENKÖ, Gil; FLAMM, Christoph; STADLER, Peter F et al.Lecture notes in computer science. 2005, pp 725-733, issn 0302-9743, isbn 3-540-28848-1, 1Vol, 9 p.Conference Paper

A note on fundamental, non-fundamental, and robust cycle basesKLEMM, Konstantin; STADLER, Peter F.Discrete applied mathematics. 2009, Vol 157, Num 10, pp 2432-2438, issn 0166-218X, 7 p.Conference Paper

CelloS : A multi-level approach to evolutionary dynamicsSTEPHAN-OTTO ATTOLINI, Camille; STADLER, Peter F; FLAMM, Christoph et al.Lecture notes in computer science. 2005, pp 500-509, issn 0302-9743, isbn 3-540-28848-1, 1Vol, 10 p.Conference Paper

Local RNA base pairing probabilities in large sequencesBERNHART, Stephan H; HOFACKER, Ivo L; STADLER, Peter F et al.Bioinformatics (Oxford. Print). 2006, Vol 22, Num 5, pp 614-615, issn 1367-4803, 2 p.Article

Alignment of RNA base pairing probability matricesHOFACKER, Ivo L; BERNHART, Stephan H. F; STADLER, Peter F et al.Bioinformatics (Oxford. Print). 2004, Vol 20, Num 14, pp 2222-2227, issn 1367-4803, 6 p.Article

Evidence for human microRNA-offset RNAs in small RNA sequencing dataLANGENBERGER, David; BERMUDEZ-SANTANA, Clara; HERTEL, Jana et al.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 18, pp 2298-2301, issn 1367-4803, 4 p.Article

Networks in Computational BiologyDRESS, Andreas; KARASÖSEN, Bülent; STADLER, Peter F et al.Discrete applied mathematics. 2009, Vol 157, Num 10, issn 0166-218X, 300 p.Conference Proceedings

A scale-free graph model based on bipartite graphsBIRMELE, Etienne.Discrete applied mathematics. 2009, Vol 157, Num 10, pp 2267-2284, issn 0166-218X, 18 p.Conference Paper

Split decomposition over an abelian group, Part 2: Group―valued split systems with weakly compatible supportDRESS, Andreas.Discrete applied mathematics. 2009, Vol 157, Num 10, pp 2349-2360, issn 0166-218X, 12 p.Conference Paper

Graph Laplacians, nodal domains, and hyperplane arrangementsBIYIKOGLU, Türker; HORDIJK, Wim; LEYDOLD, Josef et al.Linear algebra and its applications. 2004, Vol 390, pp 155-174, issn 0024-3795, 20 p.Article

deepBlockAlign: a tool for aligning RNA-seq profiles of read block patternsLANGENBERGER, David; PUNDHIR, Sachin; EKSTRØM, Claus T et al.Bioinformatics (Oxford. Print). 2012, Vol 28, Num 1, pp 17-24, issn 1367-4803, 8 p.Article

Diagonalized Cartesian products of S-prime graphs are S-primeHELLMUTH, Marc; OSTERMEIER, Lydia; STADLER, Peter F et al.Discrete mathematics. 2012, Vol 312, Num 1, pp 74-80, issn 0012-365X, 7 p.Article

An introduction to the perplex number systemCHANDLER, Jerry L. R.Discrete applied mathematics. 2009, Vol 157, Num 10, pp 2296-2309, issn 0166-218X, 14 p.Conference Paper

Consistency of the QNet algorithm for generating planar split networks from weighted quartetsGRÜNEWALD, S; MOULTON, V; SPILLNER, A et al.Discrete applied mathematics. 2009, Vol 157, Num 10, pp 2325-2334, issn 0166-218X, 10 p.Conference Paper

Prokaryote clustering based on DNA curvature distributionsKOZOBAY-AVRAHAM, L; HOSID, S; VOLKOVICH, Z et al.Discrete applied mathematics. 2009, Vol 157, Num 10, pp 2378-2387, issn 0166-218X, 10 p.Conference Paper

Discrete nodal domain theoremsDAVIES, E. Brian; GLADWELL, Graham M. L; LEYDOLD, Josef et al.Linear algebra and its applications. 2001, Vol 336, pp 51-60, issn 0024-3795Article

Symmetric circular matchings and RNA foldingHOFACKER, Ivo L; REIDYS, Christian M; STADLER, Peter F et al.Discrete mathematics. 2012, Vol 312, Num 1, pp 100-112, issn 0012-365X, 13 p.Article

Topology and prediction of RNA pseudoknotsREIDYS, Christian M; HUANG, Fenix W. D; ANDERSEN, Jørgen E et al.Bioinformatics (Oxford. Print). 2011, Vol 27, Num 8, pp 1076-1085, issn 1367-4803, 10 p.Article

RNAsnoop: efficient target prediction for H/ACA snoRNAsTAFER, Hakim; KEHR, Stephanie; HERTEL, Jana et al.Bioinformatics (Oxford. Print). 2010, Vol 26, Num 5, pp 610-616, issn 1367-4803, 7 p.Article

A refinement of the common cause principleAY, Nihat.Discrete applied mathematics. 2009, Vol 157, Num 10, pp 2439-2457, issn 0166-218X, 19 p.Conference Paper

Genetic relationship between Kangal, Akbash and other dog populationsKOBAN, Evren; SARAC, Cigdem Gökçek; ACAN, Sinan Can et al.Discrete applied mathematics. 2009, Vol 157, Num 10, pp 2335-2340, issn 0166-218X, 6 p.Conference Paper